Exclusive: CIA Station Chief in Algeria Accused of Rapes

The CIA's station chief at its sensitive post in Algeria is under investigation by the U.S. Justice Department for allegedly raping at least two Muslim women who claim he laced their drinks with a knock-out drug, U.S. law enforcement sources tell ABC News.

The suspect in the case is identified as Andrew Warren in an affidavit for a search warrant filed in federal court in Washington, D.C. by an investigator for the State Department's Diplomatic Security Service.

Click here to read the affidavit.

Watch "World News with Charles Gibson" TONIGHT at 6:30 p.m. ET for the full report.

Officials say the 41-year old Warren, a convert to Islam, was ordered home by the U.S. Ambassador, David Pearce, in October after the women came forward with their rape allegations in September.

According to the affidavit, the two women "reported the allegations in this affidavit independently of each other."

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The affidavit says the first victim says she was raped by Warren in Sept. 2007 after being invited to a party at Warren's residence by U.S. embassy employees.

She told a State Department investigator that after Warren prepared a mixed drink of cola and whiskey, she felt a "violent onset of nausea" and Warren said she should spend the night at his home.

When she woke up the next morning, according to the affidavit, "she was lying on a bed, completely nude, with no memory of how she had been undressed." She said she realized "she recently had engaged in sexual intercourse, though she had no memory of having intercourse."

According to the affidavit, a second alleged victim told a similar story, saying Warren met her at the U.S. embassy and invited her for a "tour of his home" where she said he prepared an apple martini for her "out of her sight."

The second victim said she suddenly felt faint and went to the bathroom where "V2 [victim 2] could see and hear, but she could not move," the affidavit says.

She told investigators Warren "was attempting to remove V2's her pants." The affidavit states, "Warren continued to undress V2, and told her she would feel better after a bath."